Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs4404473 chr3:48353626 A/G 4.6E-5 513 39.62 41.27 19.13 KM Plot
KIRC rs4443465 chr5:111168282 A/C 5.04E-5 525 40.28 37.53 21.82 KM Plot
KIRC rs4461012 chr15:56133376 A/T 3.05E-10 515 2.3 39.17 39.23 KM Plot
KIRC rs4495228 chr5:111168283 A/C 5.04E-5 525 40.28 37.53 21.82 KM Plot
KIRC rs4511915 chr3:48343858 G/A 3.14E-5 521 39.62 40.93 19.13 KM Plot
KIRC rs4511916 chr3:48350366 G/A 3.27E-5 523 39.62 41.27 19.13 KM Plot
KIRC rs452547 chr21:46020311 G/A 3.06E-5 517 16.37 34.87 42.27 KM Plot
KIRC rs4541174 chr19:56164716 C/T 1.79E-6 510 41.87 37.67 7.4 KM Plot
KIRC rs4596531 chr6:2400921 G/A 3.33E-9 520 39.85 40.57 12.07 KM Plot
KIRC rs4709910 chr6:165375403 C/T 3.31E-5 519 15.83 44.23 39.38 KM Plot
KIRC rs4712473 chr6:20280762 C/T 1.07E-8 521 9.02 35.83 43.68 KM Plot
KIRC rs4724620 chr7:47790912 T/C 7.37E-5 525 24.57 39.17 40.3 KM Plot
KIRC rs4801803 chr19:37966923 A/G 3.08E-5 527 21.82 45.47 38.97 KM Plot
KIRC rs4819263 chr21:47950866 G/A 1.78E-5 519 39.08 43.25 6.87 KM Plot
KIRC rs4845444 chr1:152530125 G/A 5.85E-5 525 35.6 44.05 37.77 KM Plot